Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transposase | PDPJ_1_01126 | Not Available | Positive | 1096928 - 1098010 | 42521.1 |
| dihydrolipoamide dehydrogenase | PDPJ_1_01127 | Not Available | Positive | 1098124 - 1098402 | 10331.6 |
| argininosuccinate lyase | PDPJ_1_01128 | Not Available | Negative | 1098496 - 1100373 | 69588.7 |
| argininosuccinate synthase | PDPJ_1_01129 | Not Available | Negative | 1100476 - 1101687 | 44306.3 |
| acetylglutamate kinase | PDPJ_1_01130 | Not Available | Negative | 1101765 - 1102547 | 26814.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | PDPJ_1_01131 | Not Available | Negative | 1102557 - 1103570 | 36262.6 |
| phosphoenolpyruvate carboxylase | PDPJ_1_01132 | Not Available | Positive | 1104156 - 1106786 | 98372.0 |
| hypothetical protein | PDPJ_1_01133 | Not Available | Positive | 1107155 - 1107721 | 21861.8 |
| cystathionine gamma-synthase | PDPJ_1_01134 | Not Available | Negative | 1107798 - 1108970 | 41936.9 |
| met repressor | PDPJ_1_01135 | Not Available | Positive | 1109248 - 1109565 | 12073.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

