Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase protein nape | PDPJ_1_00107 | Not Available | Positive | 93609 - 93785 | 6585.22 |
| cytochrome c-type protein torc | PDPJ_1_00108 | Not Available | Positive | 93823 - 95001 | 44114.8 |
| trimethylamine-n-oxide reductase precursor | PDPJ_1_00109 | Not Available | Positive | 95022 - 97484 | 92796.0 |
| amino-acid carrier protein alst | PDPJ_1_00110 | Not Available | Negative | 97547 - 99100 | 55124.6 |
| 6-phosphogluconate dehydrogenase, nadp(+)-dependent, decarboxylating | PDPJ_1_00111 | Not Available | Negative | 99409 - 100857 | 52694.0 |
| 6-phosphogluconolactonase | PDPJ_1_00112 | Not Available | Negative | 100868 - 101584 | 26720.6 |
| glucose-6-phosphate 1-dehydrogenase | PDPJ_1_00113 | Not Available | Negative | 101587 - 103086 | 56705.1 |
| hypothetical protein | PDPJ_1_00114 | Not Available | Positive | 103502 - 103777 | 10458.7 |
| hypothetical protein | PDPJ_1_00115 | Not Available | Positive | 103826 - 104047 | 8291.33 |
| reverse transcriptase | PDPJ_1_00116 | Not Available | Negative | 104299 - 105066 | 30286.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

