Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | PDPJ_1_01106 | Not Available | Negative | 1077331 - 1078587 | 46633.1 |
| hypothetical protein | PDPJ_1_01107 | Not Available | Positive | 1078672 - 1078947 | 10458.7 |
| hypothetical protein | PDPJ_1_01108 | Not Available | Positive | 1078996 - 1079217 | 8291.33 |
| hypothetical protein | PDPJ_1_01109 | Not Available | Negative | 1079531 - 1080463 | 34199.4 |
| tryptophan--trna ligase | PDPJ_1_01110 | Not Available | Negative | 1080721 - 1081743 | 37683.1 |
| phosphoglycolate phosphatase | PDPJ_1_01111 | Not Available | Negative | 1081841 - 1082530 | 25163.3 |
| ribulose-phosphate 3-epimerase | PDPJ_1_01112 | Not Available | Negative | 1082530 - 1083204 | 24736.0 |
| dna adenine methylase | PDPJ_1_01113 | Not Available | Negative | 1083531 - 1084373 | 32273.3 |
| hypothetical protein | PDPJ_1_01114 | Not Available | Negative | 1084428 - 1085990 | 57462.2 |
| 3-dehydroquinate synthase | PDPJ_1_01115 | Not Available | Negative | 1086005 - 1087084 | 38889.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

