Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | PDPJ_1_01076 | Not Available | Negative | 1051574 - 1052203 | 22361.0 |
| 30s ribosomal protein s10 | PDPJ_1_01077 | Not Available | Negative | 1052218 - 1052529 | 11725.3 |
| elongation factor tu | PDPJ_1_01078 | Not Available | Negative | 1053042 - 1054226 | 43009.6 |
| elongation factor g | PDPJ_1_01079 | Not Available | Negative | 1054326 - 1056431 | 77636.2 |
| 30s ribosomal protein s7 | PDPJ_1_01080 | Not Available | Negative | 1056528 - 1056998 | 17686.6 |
| 30s ribosomal protein s12 | PDPJ_1_01081 | Not Available | Negative | 1057099 - 1057473 | 13709.8 |
| protein tusb | PDPJ_1_01082 | Not Available | Negative | 1057650 - 1057943 | 11131.1 |
| intracellular sulfur oxidation protein dsrf | PDPJ_1_01083 | Not Available | Negative | 1057951 - 1058307 | 13222.0 |
| sulfurtransferase tusd | PDPJ_1_01084 | Not Available | Negative | 1058319 - 1058711 | 14108.6 |
| yheo-like pas domain protein | PDPJ_1_01085 | Not Available | Negative | 1058708 - 1059412 | 25966.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

