Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_01036 | Not Available | Positive | 1023367 - 1024704 | 49459.9 |
| o-antigen ligase | PDPJ_1_01037 | Not Available | Positive | 1024711 - 1026033 | 48912.0 |
| putative teichuronic acid biosynthesis glycosyltransferase tuah | PDPJ_1_01038 | Not Available | Positive | 1026034 - 1027137 | 42081.9 |
| hypothetical protein | PDPJ_1_01039 | Not Available | Positive | 1027237 - 1027587 | 13134.9 |
| cryptic autophosphorylating protein tyrosine kinase etk | PDPJ_1_01040 | Not Available | Positive | 1027587 - 1029026 | 55127.4 |
| d-inositol 3-phosphate glycosyltransferase | PDPJ_1_01041 | Not Available | Positive | 1029030 - 1030100 | 40196.2 |
| udp-n-acetylgalactosamine-undecaprenyl- phosphate n-acetylgalactosaminephosphotransferase | PDPJ_1_01042 | Not Available | Positive | 1030097 - 1031875 | 67307.2 |
| anti-sigma-b factor antagonist | PDPJ_1_01043 | Not Available | Positive | 1031933 - 1032241 | 11468.0 |
| outer membrane porin f precursor | PDPJ_1_01044 | Not Available | Positive | 1032238 - 1033023 | 30289.1 |
| polysialic acid transport protein kpsd precursor | PDPJ_1_01045 | Not Available | Positive | 1033020 - 1035698 | 98683.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

