Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | PDPJ_1_01024 | Not Available | Negative | 998817 - 1000160 | 51753.8 |
| single-stranded dna-binding protein | PDPJ_1_01025 | Not Available | Negative | 1000342 - 1000890 | 20102.5 |
| uvrabc system protein a | PDPJ_1_01026 | Not Available | Positive | 1001157 - 1003982 | 104112.0 |
| o-antigen ligase | PDPJ_1_01027 | Not Available | Positive | 1004135 - 1005667 | 58181.1 |
| purine catabolism protein pucg | PDPJ_1_01028 | Not Available | Negative | 1005940 - 1007058 | 40625.0 |
| hypothetical protein | PDPJ_1_01029 | Not Available | Negative | 1007369 - 1007590 | 8272.28 |
| hypothetical protein | PDPJ_1_01030 | Not Available | Negative | 1007639 - 1007914 | 10458.7 |
| lysine-sensitive aspartokinase 3 | PDPJ_1_01031 | Not Available | Positive | 1008397 - 1009776 | 49472.6 |
| methionine synthase | PDPJ_1_01032 | Not Available | Negative | 1009836 - 1013501 | 135263.0 |
| na(+)/h(+) antiporter nhap | PDPJ_1_01033 | Not Available | Positive | 1013698 - 1014978 | 46512.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

