Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | PDPJ_1_00964 | Not Available | Negative | 944024 - 944416 | 14798.1 |
| 50s ribosomal protein l13 | PDPJ_1_00965 | Not Available | Negative | 944432 - 944860 | 15853.5 |
| afg1-like atpase | PDPJ_1_00966 | Not Available | Negative | 945129 - 946232 | 43000.8 |
| hypothetical protein | PDPJ_1_00967 | Not Available | Positive | 946382 - 946507 | 4719.97 |
| hypothetical protein | PDPJ_1_00968 | Not Available | Negative | 946674 - 946895 | 8291.33 |
| hypothetical protein | PDPJ_1_00969 | Not Available | Negative | 946944 - 947219 | 10458.7 |
| inner membrane protein yhcb | PDPJ_1_00970 | Not Available | Positive | 947266 - 947637 | 13784.8 |
| periplasmic serine endoprotease degp precursor | PDPJ_1_00971 | Not Available | Positive | 947751 - 949118 | 48150.4 |
| serine endoprotease degs | PDPJ_1_00972 | Not Available | Positive | 949266 - 950381 | 39730.2 |
| group ii intron-encoded protein ltra | PDPJ_1_00973 | Not Available | Negative | 950467 - 951777 | 50337.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

