Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein activator lpoa precursor | PDPJ_1_00954 | Not Available | Positive | 935131 - 937053 | 70580.0 |
| nicotinate-nucleotide pyrophosphorylase[carboxylating] | PDPJ_1_00955 | Not Available | Negative | 937103 - 937990 | 31984.4 |
| hypothetical protein | PDPJ_1_00956 | Not Available | Positive | 938227 - 938601 | 14398.3 |
| dnaa initiator-associating protein diaa | PDPJ_1_00957 | Not Available | Positive | 938605 - 939195 | 20910.2 |
| outer membrane lipoprotein | PDPJ_1_00958 | Not Available | Positive | 939199 - 939735 | 19561.7 |
| stringent starvation protein b | PDPJ_1_00959 | Not Available | Negative | 939788 - 940276 | 17666.8 |
| stringent starvation protein a | PDPJ_1_00960 | Not Available | Negative | 940293 - 940931 | 24348.3 |
| cytochrome b/c1 | PDPJ_1_00961 | Not Available | Negative | 941017 - 941754 | 27932.6 |
| cytochrome b | PDPJ_1_00962 | Not Available | Negative | 941751 - 943016 | 48353.8 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PDPJ_1_00963 | Not Available | Negative | 943016 - 943609 | 21196.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

