Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | PDPJ_1_00944 | Not Available | Negative | 921303 - 922763 | 52782.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | PDPJ_1_00945 | Not Available | Negative | 922779 - 925133 | 85214.7 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | PDPJ_1_00946 | Not Available | Negative | 925127 - 926470 | 47714.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PDPJ_1_00947 | Not Available | Negative | 926474 - 927556 | 40218.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PDPJ_1_00948 | Not Available | Negative | 927553 - 928935 | 49013.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PDPJ_1_00949 | Not Available | Negative | 928932 - 930449 | 54076.4 |
| peptidoglycan synthase ftsi precursor | PDPJ_1_00950 | Not Available | Negative | 930474 - 932204 | 63055.7 |
| cell division protein ftsl | PDPJ_1_00951 | Not Available | Negative | 932207 - 932530 | 12126.9 |
| ribosomal rna small subunit methyltransferase h | PDPJ_1_00952 | Not Available | Negative | 932527 - 933474 | 34939.8 |
| ribosomal rna small subunit methyltransferase i | PDPJ_1_00953 | Not Available | Negative | 934218 - 935078 | 31342.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

