Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | PDPJ_1_00924 | Not Available | Negative | 895681 - 897111 | 50954.9 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | PDPJ_1_00925 | Not Available | Negative | 897289 - 899166 | 65230.1 |
| pyruvate dehydrogenase e1 component | PDPJ_1_00926 | Not Available | Negative | 899179 - 901839 | 99267.9 |
| pyruvate dehydrogenase complex repressor | PDPJ_1_00927 | Not Available | Negative | 901920 - 902693 | 29634.4 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | PDPJ_1_00928 | Not Available | Negative | 903053 - 903631 | 21498.2 |
| fimbrial protein precursor | PDPJ_1_00929 | Not Available | Positive | 904285 - 904650 | 12828.7 |
| type ii secretion system protein e | PDPJ_1_00930 | Not Available | Positive | 904657 - 906348 | 62605.0 |
| type ii secretion system protein f | PDPJ_1_00931 | Not Available | Positive | 906414 - 907640 | 45077.1 |
| type 4 prepilin-like proteins leader peptide-processing enzyme | PDPJ_1_00932 | Not Available | Positive | 907823 - 908701 | 32431.7 |
| dephospho-coa kinase | PDPJ_1_00933 | Not Available | Positive | 908703 - 909305 | 22242.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

