Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. piscicida |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Paralichthys olivaceus, Seriola quinqueradiata, Seriola lalandi |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332071 bp
Thymine Count
1333580 bp
Guanine Count
937706 bp
Cytosine Count
943894 bp
Genome Length
4547251 bp
Protein-coding Genes
5107 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PDPJ_1_00087 | Not Available | Positive | 71727 - 72707 | 37087.7 |
| gtra-like protein | PDPJ_1_00088 | Not Available | Positive | 72700 - 73080 | 14411.9 |
| mannosyltransferase | PDPJ_1_00089 | Not Available | Positive | 73077 - 74231 | 44140.7 |
| ribokinase | PDPJ_1_00090 | Not Available | Positive | 74432 - 75652 | 45009.9 |
| fatty acid elongase 3-ketoacyl-coa synthase 1 | PDPJ_1_00091 | Not Available | Positive | 75753 - 76754 | 35350.1 |
| ribokinase | PDPJ_1_00092 | Not Available | Positive | 76774 - 77697 | 32640.7 |
| hypothetical protein | PDPJ_1_00093 | Not Available | Negative | 77942 - 78163 | 8291.33 |
| hypothetical protein | PDPJ_1_00094 | Not Available | Negative | 78212 - 78487 | 10458.7 |
| acetolactate synthase | PDPJ_1_00095 | Not Available | Positive | 78912 - 80576 | 60048.9 |
| alpha-acetolactate decarboxylase precursor | PDPJ_1_00096 | Not Available | Positive | 80599 - 81306 | 26255.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

