Secundilactobacillus silagincola

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Secundilactobacillus

Description

Secundilactobacillus silagincola is a bacterial species characterized by a single replicon, which suggests a relatively simple genomic structure. The organism is classified under the genus Secundilactobacillus, indicating its relation to other lactic acid bacteria known for their roles in fermentation processes. The genome of Secundilactobacillus silagincola is represented by the accession number BCMJ00000000.1, which is important for researchers seeking to study its genetic material or explore its functionalities further. This accession provides a unique identifier for the organism's genomic data, allowing for ease of reference in scientific literature and databases. Biologically, lactic acid bacteria like Secundilactobacillus silagincola are often involved in various fermentation processes, contributing to the preservation and flavor development in food products. Additionally, their metabolic activities can influence the microbial community structures in their ecological niches. Understanding the specific traits of Secundilactobacillus silagincola can shed light on its potential applications in food science and microbiology, particularly in the context of fermentation and the development of functional foods. The simplicity of its genomic structure, paired with its ecological roles, makes it a point of interest for further studies on microbial interactions and applications in food technology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusSecundilactobacillus
SpeciesSecundilactobacillus silagincola
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Secundilactobacillus silagincola DNA, scaffold: sequence86,

Gene Summary

Adenine Count

744753 bp

Thymine Count

745409 bp

Guanine Count

561192 bp

Cytosine Count

566054 bp

Genome Length

2617693 bp

Protein-coding Genes

2347 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine/ornithine antiporterIWT5_00015Not AvailableNegative18882 - 2030051243.4
peptide abc transporter substrate-binding proteinIWT5_00016Not AvailableNegative20631 - 2227760476.8
prolyl aminopeptidaseIWT5_00017Not AvailableNegative22264 - 2320236465.8
n-acetylmuramyl-l-alanine amidase, negative regulator of ampc, ampdIWT5_00018Not AvailableNegative23656 - 2461836003.4
hypothetical proteinIWT5_00019Not AvailableNegative24611 - 2611955150.6
hypothetical proteinIWT5_00020Not AvailablePositive26688 - 268225080.0
2-keto-4-pentenoate hydrataseIWT5_00021Not AvailablePositive26962 - 2777730127.3
aspartate aminotransferaseIWT5_00022Not AvailableNegative28002 - 2917142668.0
glutamine abc transporter substrate-binding and permease proteinIWT5_00023Not AvailablePositive29710 - 3114952370.6
glutamine abc transporter atp-binding proteinIWT5_00024Not AvailablePositive31146 - 3188927057.6

Displaying genes 21 – 30 of 2414 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.