Secundilactobacillus oryzae

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Secundilactobacillus

Description

Secundilactobacillus oryzae is characterized by having a single replicon, which is significant for its genomic structure and stability. The organism is cataloged under the accession number BBJM00000000.1, indicating the availability of its genomic sequence for further study and characterization. As a member of the Lactobacillus genus, it is likely involved in fermentation processes, potentially contributing to various food products. Members of this genus are generally recognized for their role in the production of lactic acid, which can inhibit the growth of spoilage organisms and pathogens, thus enhancing food preservation and safety. From a biological and ecological perspective, the presence of Secundilactobacillus oryzae in specific environments could indicate its adaptation to particular ecological niches, possibly including fermented foods or other anaerobic conditions where lactic acid fermentation is beneficial. Its single replicon trait may also suggest a streamlined genomic organization that could confer advantages in metabolic efficiency and adaptability in its ecological roles. Understanding the functional implications of its genomic characteristics could provide insights into its applications in food science and microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusSecundilactobacillus
SpeciesSecundilactobacillus oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Secundilactobacillus oryzae DNA, contig: sequence93, strain:

Gene Summary

Adenine Count

530819 bp

Thymine Count

533072 bp

Guanine Count

390762 bp

Cytosine Count

405741 bp

Genome Length

1860394 bp

Protein-coding Genes

1826 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
agmatine deiminaseLOSG293_040660Not AvailablePositive415945 - 41703940858.0
agmatine deiminaseLOSG293_040670Not AvailablePositive417148 - 41825141138.5
transcriptional regulatorLOSG293_040680Not AvailablePositive418253 - 41902930107.1
hypothetical proteinLOSG293_040690Not AvailablePositive419128 - 42000033458.0
hypothetical proteinLOSG293_040700Not AvailableNegative420219 - 42080922159.8
transcriptional regulatorLOSG293_040710Not AvailableNegative420903 - 42178732582.1
amino acid abc transporter permease proteinLOSG293_040720Not AvailablePositive421767 - 4219496911.37
surface layer proteinLOSG293_040730Not AvailablePositive422358 - 42363544564.2
hypothetical proteinLOSG293_040740Not AvailableNegative423772 - 4239366487.15
antibiotic biosynthesis monooxygenase subfamilyLOSG293_040750Not AvailableNegative423971 - 42425210890.8

Displaying genes 531 – 540 of 1962 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.