Geomicrobium sp. JCM 19037

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19037 is a microbial strain characterized by a single replicon, indicating a streamlined genetic organization. The strain is cataloged under the accession number BAWZ00000000.1, which serves as a reference for its genomic data. As a member of the Geomicrobium genus, this bacterium is likely to be involved in biogeochemical processes within its environment, particularly those related to geomicrobiology. While specific metabolic pathways and ecological roles are not detailed, members of this genus are known for their potential interactions with minerals and their roles in biogeochemical cycling. The presence of a single replicon may suggest a level of genetic stability and adaptability, allowing Geomicrobium sp. JCM 19037 to thrive in varying environmental conditions. This trait could provide insights into its ecological niche, possibly allowing it to participate effectively in soil or sediment ecosystems where it may interact with other microorganisms and contribute to nutrient cycling. In summary, Geomicrobium sp. JCM 19037, with its single replicon and documented genomic data, represents a unique entity within the geomicrobiological landscape. Its ecological significance may lie in its potential role in biogeochemical cycles, emphasizing the intricate relationships between microorganisms and their environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19037 DNA, contig: JCM19037.contig00075,

Gene Summary

Adenine Count

1154115 bp

Thymine Count

1125163 bp

Guanine Count

948751 bp

Cytosine Count

865529 bp

Genome Length

4093558 bp

Protein-coding Genes

4400 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap dicarboxylate transporter, dctm subunit, unknown substrate 3JCM19037_4037Not AvailablePositive3400587 - 340186945712.3
aldehyde dehydrogenaseJCM19037_4038Not AvailablePositive3401898 - 340335853393.4
p-hydroxybenzoate hydroxylaseJCM19037_4039Not AvailablePositive3403389 - 340459945409.9
putative decarboxylaseJCM19037_4041Not AvailableNegative3404767 - 340556729910.3
transcriptional regulator, iclr familyJCM19037_4042Not AvailableNegative3405593 - 340638129650.6
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseJCM19037_4043Not AvailablePositive3406560 - 340803053742.0
4-oxalocrotonate decarboxylaseJCM19037_4044Not AvailablePositive3408047 - 340882327708.1
4-oxalocrotonate decarboxylaseJCM19037_4045Not AvailablePositive3408836 - 340962428237.1
hypothetical proteinJCM19037_4046Not AvailablePositive3409635 - 34098387518.09
3,4-dihydroxyphenylacetate 2,3-dioxygenaseJCM19037_4047Not AvailablePositive3409839 - 341066030364.4

Displaying genes 3781 – 3790 of 4552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.