Geomicrobium sp. JCM 19037

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Genus

Geomicrobium

Description

Geomicrobium sp. JCM 19037 is a microbial strain characterized by a single replicon, indicating a streamlined genetic organization. The strain is cataloged under the accession number BAWZ00000000.1, which serves as a reference for its genomic data. As a member of the Geomicrobium genus, this bacterium is likely to be involved in biogeochemical processes within its environment, particularly those related to geomicrobiology. While specific metabolic pathways and ecological roles are not detailed, members of this genus are known for their potential interactions with minerals and their roles in biogeochemical cycling. The presence of a single replicon may suggest a level of genetic stability and adaptability, allowing Geomicrobium sp. JCM 19037 to thrive in varying environmental conditions. This trait could provide insights into its ecological niche, possibly allowing it to participate effectively in soil or sediment ecosystems where it may interact with other microorganisms and contribute to nutrient cycling. In summary, Geomicrobium sp. JCM 19037, with its single replicon and documented genomic data, represents a unique entity within the geomicrobiological landscape. Its ecological significance may lie in its potential role in biogeochemical cycles, emphasizing the intricate relationships between microorganisms and their environments.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Geomicrobium sp. JCM 19037 DNA, contig: JCM19037.contig00075,

Gene Summary

Adenine Count

1154115 bp

Thymine Count

1125163 bp

Guanine Count

948751 bp

Cytosine Count

865529 bp

Genome Length

4093558 bp

Protein-coding Genes

4400 genes

Non-Coding Genes

152 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic component of efflux systemJCM19037_3567Not AvailablePositive3002717 - 300380841187.1
abc transporterJCM19037_3568Not AvailablePositive3003786 - 300447525498.8
macrolide export atp-binding/permease protein macbJCM19037_3569Not AvailablePositive3004462 - 300566043598.1
hypothetical proteinJCM19037_3570Not AvailablePositive3005739 - 30058975964.87
diaminohydroxyphosphoribosylaminopyrimidine deaminaseJCM19037_3571Not AvailablePositive3006386 - 300747539339.2
riboflavin synthaseJCM19037_3572Not AvailablePositive3007456 - 300799519685.7
3,4-dihydroxy-2-butanone 4-phosphate synthaseJCM19037_3573Not AvailablePositive3008044 - 300923043763.4
6,7-dimethyl-8-ribityllumazine synthaseJCM19037_3574Not AvailablePositive3009243 - 300970016410.8
cystathionine gamma-synthaseJCM19037_3575Not AvailablePositive3009854 - 301099341724.7
Trna-metNot AvailableNot AvailablePositive3011207 - 3011282Not Available

Displaying genes 3341 – 3350 of 4552 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.