Xanthomonas arboricola pv. pruni str. MAFF 311562

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas arboricola pv. pruni strain MAFF 311562 is characterized as a rod-shaped bacterium with a single flagellum, which facilitates its motility. This strain belongs to the broader species Xanthomonas arboricola, known for its role as a plant pathogen, particularly affecting stone fruits. The genetic information for this strain is cataloged under the accession number BAVB00000000.1, indicating that it has been sequenced and is available for further study. The presence of a single replicon suggests a streamlined genomic structure, which is common in many bacterial species, allowing for efficient replication and resource utilization. Xanthomonas arboricola pv. pruni is of significant interest due to its impact on agricultural practices, particularly in the cultivation of prunus species, such as cherries and peaches. Understanding the traits of this strain can provide insights into its pathogenic mechanisms and interactions with host plants, which are critical for developing management strategies in agriculture. The study of its motility and genetic makeup may also reveal adaptations that enhance its survival and virulence in diverse environments. Overall, the traits of Xanthomonas arboricola pv. pruni strain MAFF 311562 underscore its role in plant pathology and the necessity for ongoing research to mitigate its effects on crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas arboricola
Strainpv. pruni MAFF 311562

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas arboricola pv. pruni str. MAFF 311562
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas arboricola pv. pruni str. MAFF 311562 DNA, contig:

Gene Summary

Adenine Count

883757 bp

Thymine Count

880579 bp

Guanine Count

1659037 bp

Cytosine Count

1662075 bp

Genome Length

5085495 bp

Protein-coding Genes

4842 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer-membrane lipoprotein carrier proteinXPU_2431Not AvailablePositive2444282 - 244491123003.0
type iii effector protein xopz1XPU_2432Not AvailableNegative2445014 - 2449069147957.0
recombination factor protein raraXPU_2433Not AvailablePositive2449527 - 245079245998.8
camphor resistance protein crcbXPU_2434Not AvailablePositive2450978 - 245137914049.7
acetyl-coa acetyltransferaseXPU_2435Not AvailableNegative2451706 - 245291141941.9
3-hydroxyacyl-coa dehydrogenaseXPU_2436Not AvailableNegative2453066 - 245543885640.0
tetr family transcriptional regulatorXPU_2437Not AvailableNegative2455464 - 245609623276.8
nucleoside diphosphate kinaseXPU_2438Not AvailablePositive2456314 - 245673915288.1
radical sam enzyme, cfr familyXPU_2439Not AvailablePositive2456758 - 245796344966.2
type iv pilus biogenesis/stability protein pilwXPU_2440Not AvailablePositive2457974 - 245876227565.6

Displaying genes 2471 – 2480 of 4953 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.