Pseudomonas alcaligenes NBRC 14159

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Aquipseudomonas

Description

Pseudomonas alcaligenes NBRC 14159 is a notable bacterium primarily found in diverse soil environments, including crude oil-contaminated soil, forest soil, and mangrove soil, particularly in the Sundarbans mangrove ecosystem. This organism thrives in aerobic conditions, indicating its reliance on oxygen for metabolic processes. With a single replicon, Pseudomonas alcaligenes NBRC 14159 exhibits a streamlined genetic structure, which may contribute to its adaptability in varying soil environments. The genomic sequence is cataloged under the accession number BATI00000000.1, providing a reference for further studies on its genetic and functional characteristics. The presence of Pseudomonas alcaligenes in crude oil-contaminated areas underscores its potential role in bioremediation processes. Its ability to thrive in such polluted habitats suggests that this bacterium might possess enzymatic pathways capable of degrading hydrocarbons, thus contributing to the ecological restoration of contaminated soils. Moreover, its isolation from mangrove and forest soils indicates its ecological versatility and potential interactions within diverse microbial communities, further supporting the importance of Pseudomonas alcaligenes in maintaining soil health and function.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusAquipseudomonas
SpeciesAquipseudomonas alcaligenes
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcrude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas alcaligenes NBRC 14159 DNA, contig: PA6122, whole

Gene Summary

Adenine Count

859514 bp

Thymine Count

839884 bp

Guanine Count

1541484 bp

Cytosine Count

1582508 bp

Genome Length

4823390 bp

Protein-coding Genes

4457 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinPA6_009_00170Not AvailableNegative1422520 - 142318222893.5
hypothetical proteinPA6_009_00180Not AvailableNegative1423179 - 142364918275.7
Hypothetical proteinPA6_009_00190Not AvailableNegative1423690 - 142459233105.1
Hypothetical proteinPA6_009_00200Not AvailableNegative1424589 - 142494512445.2
Tail fiber proteinPA6_009_00210Not AvailableNegative1424942 - 142615343011.0
Hypothetical proteinPA6_009_00220Not AvailableNegative1426174 - 142779957628.9
Putative tail fiber assembly proteinPA6_009_00230Not AvailableNegative1428010 - 142949451475.5
Virion-associated phage proteinPA6_009_00240Not AvailableNegative1429491 - 142977210107.1
hypothetical proteinPA6_009_00250Not AvailableNegative1429773 - 143091839475.7
Virion-associated phage proteinPA6_009_00260Not AvailableNegative1430929 - 143135714738.1

Displaying genes 11 – 20 of 4593 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039925Aeromonas jandaei Riv2Not available29908-03-0Not available
BASm0040017Bacillus nealsonii AAU1Not available15502-74-6Not available
BASm0040171Clostridium sp.Not available124-58-3Not available
BASm0040275Halobacterium sp. NRC-1Not availableNot availableNot available

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.