Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Aquipseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Aquipseudomonas |
| Species | Aquipseudomonas alcaligenes |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859514 bp
Thymine Count
839884 bp
Guanine Count
1541484 bp
Cytosine Count
1582508 bp
Genome Length
4823390 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reca protein | PA6_034_00180 | Not Available | Negative | 3700174 - 3701223 | 36953.5 |
| hypothetical protein | PA6_034_00190 | Not Available | Negative | 3701311 - 3701811 | 17066.2 |
| dna mismatch repair protein muts | PA6_034_00200 | Not Available | Positive | 3701888 - 3704455 | 94980.2 |
| 4fe-4s ferredoxin | PA6_034_00210 | Not Available | Positive | 3704593 - 3704916 | 12260.3 |
| putative rna polymerase sigma factor | PA6_034_00220 | Not Available | Negative | 3705356 - 3706360 | 38223.6 |
| lipoprotein nlpd | PA6_034_00230 | Not Available | Negative | 3706557 - 3707438 | 30819.0 |
| protein-l-isoaspartate o-methyltransferase | PA6_034_00240 | Not Available | Negative | 3707537 - 3708211 | 24963.2 |
| 5'-nucleotidase sure | PA6_034_00250 | Not Available | Negative | 3708211 - 3708960 | 26390.6 |
| trna pseudouridine synthase d | PA6_034_00260 | Not Available | Negative | 3708948 - 3710006 | 38344.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PA6_034_00270 | Not Available | Negative | 3710003 - 3710476 | 16666.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
