Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Aquipseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Aquipseudomonas |
| Species | Aquipseudomonas alcaligenes |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
859514 bp
Thymine Count
839884 bp
Guanine Count
1541484 bp
Cytosine Count
1582508 bp
Genome Length
4823390 bp
Protein-coding Genes
4457 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna protecting protein dpra | PA6_016_00270 | Not Available | Positive | 2154852 - 2155940 | 37950.6 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | PA6_016_00280 | Not Available | Positive | 2155980 - 2156537 | 20522.7 |
| quinone oxidoreductase | PA6_016_00290 | Not Available | Negative | 2156544 - 2157521 | 34333.1 |
| coproporphyrinogen-iii oxidase | PA6_016_00300 | Not Available | Positive | 2157600 - 2158553 | 35609.8 |
| shikimate dehydrogenase | PA6_016_00310 | Not Available | Positive | 2158666 - 2159484 | 29017.7 |
| hypothetical protein | PA6_016_00320 | Not Available | Positive | 2159486 - 2160352 | 31905.2 |
| d-alanyl-d-alanine endopeptidase | PA6_016_00330 | Not Available | Positive | 2160430 - 2161326 | 32557.7 |
| Trna-thr | Not Available | Not Available | Positive | 2161383 - 2161458 | Not Available |
| putative gamma-glutamylputrescine synthetase | PA6_016_00340 | Not Available | Negative | 2161513 - 2162862 | 50261.1 |
| putative transcriptional regulator | PA6_016_00350 | Not Available | Negative | 2162881 - 2163438 | 20268.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
