Gordonia amicalis NBRC 100051 = JCM 11271

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amicalis NBRC 100051 = JCM 11271 is an aerobic actinobacterium characterized by its mesophilic nature, with an optimal growth temperature of 29°C. This organism possesses true flagella, which may contribute to its motility in various environments. Gordonia amicalis has been cataloged with one replicon, indicating a relatively simple genomic organization. The strain is classified under the GenBank accession number BANS00000000.1, which serves as a reference for its genetic material. The aerobic requirement highlights its dependence on oxygen for growth and metabolism, suggesting its potential role in environments where oxygen is available. From a biological and ecological perspective, the presence of Gordonia amicalis in environments rich in organic compounds may be significant, as many Gordonia species are known for their ability to degrade a wide range of environmental pollutants, including aromatic compounds. This trait may position Gordonia amicalis as a candidate for bioremediation applications, particularly in polluted habitats where aerobic conditions prevail. Further research into its metabolic capabilities could enhance our understanding of its ecological roles and applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amicalis
StrainNBRC 100051 = JCM 11271

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amicalis NBRC 100051 = JCM 11271 DNA, contig: GOAMI94,

Gene Summary

Adenine Count

801293 bp

Thymine Count

800045 bp

Guanine Count

1659788 bp

Cytosine Count

1654345 bp

Genome Length

4915471 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trk system potassium uptake protein trkaGOAMI_19_00990Not AvailableNegative2319428 - 232009023682.6
trk system potassium uptake protein trkaGOAMI_19_01000Not AvailableNegative2320108 - 232077323925.4
hypothetical proteinGOAMI_19_01010Not AvailablePositive2320852 - 232286772912.3
putative rna methyltransferaseGOAMI_19_01020Not AvailablePositive2322864 - 232415645826.1
1-deoxy-d-xylulose-5-phosphate synthaseGOAMI_19_01030Not AvailablePositive2324285 - 232623768776.0
carboxylate-amine ligaseGOAMI_19_01040Not AvailablePositive2326251 - 232735139548.0
hypothetical proteinGOAMI_19_01050Not AvailableNegative2327374 - 232780215118.0
ribonuclease dGOAMI_19_01060Not AvailableNegative2327883 - 232915745988.7
hypothetical proteinGOAMI_19_01070Not AvailableNegative2329163 - 232981622653.5
uroporphyrinogen decarboxylaseGOAMI_19_01080Not AvailablePositive2329948 - 233100937508.3

Displaying genes 2191 – 2200 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.