Gordonia amicalis NBRC 100051 = JCM 11271

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amicalis NBRC 100051 = JCM 11271 is an aerobic actinobacterium characterized by its mesophilic nature, with an optimal growth temperature of 29°C. This organism possesses true flagella, which may contribute to its motility in various environments. Gordonia amicalis has been cataloged with one replicon, indicating a relatively simple genomic organization. The strain is classified under the GenBank accession number BANS00000000.1, which serves as a reference for its genetic material. The aerobic requirement highlights its dependence on oxygen for growth and metabolism, suggesting its potential role in environments where oxygen is available. From a biological and ecological perspective, the presence of Gordonia amicalis in environments rich in organic compounds may be significant, as many Gordonia species are known for their ability to degrade a wide range of environmental pollutants, including aromatic compounds. This trait may position Gordonia amicalis as a candidate for bioremediation applications, particularly in polluted habitats where aerobic conditions prevail. Further research into its metabolic capabilities could enhance our understanding of its ecological roles and applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amicalis
StrainNBRC 100051 = JCM 11271

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amicalis NBRC 100051 = JCM 11271


Gene Summary

Adenine Count

801293 bp

Thymine Count

800045 bp

Guanine Count

1659788 bp

Cytosine Count

1654345 bp

Genome Length

4915471 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase flavoprotein subunitGOAMI_01_01980Not AvailableNegative203760 - 20551464704.6
succinate dehydrogenase hydrophobic membrane anchor proteinGOAMI_01_01990Not AvailableNegative205529 - 20598416843.5
succinate dehydrogenase cytochrome b subunitGOAMI_01_02000Not AvailableNegative205997 - 20640115417.2
cytidine deaminaseGOAMI_01_02010Not AvailablePositive206627 - 20703114265.2
pyrimidine nucleoside phosphorylaseGOAMI_01_02020Not AvailablePositive207028 - 20837446723.6
adenosine deaminaseGOAMI_01_02030Not AvailablePositive208371 - 20948040495.2
hypothetical proteinGOAMI_01_02040Not AvailableNegative209736 - 21100446724.2
nlpc/p60 family proteinGOAMI_01_02050Not AvailableNegative211083 - 21204233312.4
hypothetical proteinGOAMI_01_02060Not AvailableNegative212039 - 21239512338.3
uracil phosphoribosyltransferaseGOAMI_01_02070Not AvailablePositive212500 - 21312321987.7

Displaying genes 201 – 210 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.