Gordonia amicalis NBRC 100051 = JCM 11271

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amicalis NBRC 100051 = JCM 11271 is an aerobic actinobacterium characterized by its mesophilic nature, with an optimal growth temperature of 29°C. This organism possesses true flagella, which may contribute to its motility in various environments. Gordonia amicalis has been cataloged with one replicon, indicating a relatively simple genomic organization. The strain is classified under the GenBank accession number BANS00000000.1, which serves as a reference for its genetic material. The aerobic requirement highlights its dependence on oxygen for growth and metabolism, suggesting its potential role in environments where oxygen is available. From a biological and ecological perspective, the presence of Gordonia amicalis in environments rich in organic compounds may be significant, as many Gordonia species are known for their ability to degrade a wide range of environmental pollutants, including aromatic compounds. This trait may position Gordonia amicalis as a candidate for bioremediation applications, particularly in polluted habitats where aerobic conditions prevail. Further research into its metabolic capabilities could enhance our understanding of its ecological roles and applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amicalis
StrainNBRC 100051 = JCM 11271

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amicalis NBRC 100051 = JCM 11271 DNA, contig: GOAMI94,

Gene Summary

Adenine Count

801293 bp

Thymine Count

800045 bp

Guanine Count

1659788 bp

Cytosine Count

1654345 bp

Genome Length

4915471 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aspartate carbamoyltransferaseGOAMI_17_00880Not AvailableNegative2108294 - 210924433872.6
bifunctional protein pyrrGOAMI_17_00890Not AvailableNegative2109244 - 210982820547.7
n utilization substance protein b homologGOAMI_17_00900Not AvailableNegative2109951 - 211043617475.5
elongation factor pGOAMI_17_00910Not AvailableNegative2110440 - 211100320509.4
putative peptidaseGOAMI_17_00920Not AvailableNegative2111025 - 211214338780.0
hypothetical proteinGOAMI_17_00930Not AvailablePositive2112244 - 211273817410.2
3-dehydroquinate synthaseGOAMI_17_00940Not AvailableNegative2112820 - 211393238874.6
shikimate kinaseGOAMI_17_00950Not AvailableNegative2113943 - 211449119424.8
chorismate synthaseGOAMI_17_00960Not AvailableNegative2114488 - 211570542332.6
hypothetical proteinGOAMI_17_00970Not AvailableNegative2115739 - 211619415556.3

Displaying genes 1991 – 2000 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.