Gordonia amicalis NBRC 100051 = JCM 11271

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amicalis NBRC 100051 = JCM 11271 is an aerobic actinobacterium characterized by its mesophilic nature, with an optimal growth temperature of 29°C. This organism possesses true flagella, which may contribute to its motility in various environments. Gordonia amicalis has been cataloged with one replicon, indicating a relatively simple genomic organization. The strain is classified under the GenBank accession number BANS00000000.1, which serves as a reference for its genetic material. The aerobic requirement highlights its dependence on oxygen for growth and metabolism, suggesting its potential role in environments where oxygen is available. From a biological and ecological perspective, the presence of Gordonia amicalis in environments rich in organic compounds may be significant, as many Gordonia species are known for their ability to degrade a wide range of environmental pollutants, including aromatic compounds. This trait may position Gordonia amicalis as a candidate for bioremediation applications, particularly in polluted habitats where aerobic conditions prevail. Further research into its metabolic capabilities could enhance our understanding of its ecological roles and applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amicalis
StrainNBRC 100051 = JCM 11271

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amicalis NBRC 100051 = JCM 11271 DNA, contig: GOAMI94,

Gene Summary

Adenine Count

801293 bp

Thymine Count

800045 bp

Guanine Count

1659788 bp

Cytosine Count

1654345 bp

Genome Length

4915471 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoglycerate kinaseGOAMI_17_00580Not AvailableNegative2076226 - 207743741745.7
glyceraldehyde-3-phosphate dehydrogenaseGOAMI_17_00590Not AvailableNegative2077476 - 207849535778.7
putative transcription regulator whiaGOAMI_17_00600Not AvailableNegative2078674 - 207965735095.3
hypothetical proteinGOAMI_17_00610Not AvailableNegative2079722 - 208074135944.2
putative nucleotide-binding proteinGOAMI_17_00620Not AvailableNegative2080738 - 208170635156.7
uvrabc system protein cGOAMI_17_00630Not AvailableNegative2081678 - 208372975753.8
hypothetical proteinGOAMI_17_00640Not AvailableNegative2083740 - 208420417120.2
6,7-dimethyl-8-ribityllumazine synthaseGOAMI_17_00650Not AvailableNegative2084201 - 208471317139.4
riboflavin biosynthesis protein ribbaGOAMI_17_00660Not AvailableNegative2084710 - 208602947143.7
riboflavin synthase alpha chainGOAMI_17_00670Not AvailableNegative2086050 - 208669422567.7

Displaying genes 1961 – 1970 of 4579 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.