Bacteroides pyogenes DSM 20611 = JCM 6294

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides pyogenes DSM 20611, also known as JCM 6294, is a Gram-negative bacterium characterized by its rod shape and the presence of flagella. This motility feature may play a role in its ecological niche and interactions within microbial communities. The organism contains a single replicon, indicating a streamlined genomic structure that could contribute to its adaptability and survival in various environments. The accession number for Bacteroides pyogenes is BAIR00000000.1, which allows for the identification and retrieval of its genetic information from genomic databases. This can facilitate further research into its genetic makeup and potential applications in microbiology. In terms of ecological implications, Bacteroides species are generally known to inhabit the gastrointestinal tracts of various animals, including humans, where they play a significant role in the digestion of complex polysaccharides. The presence of Bacteroides pyogenes within this ecosystem could suggest its involvement in nutrient cycling and maintaining gut health. Further studies could elucidate its specific contributions to microbial diversity and functionality in its habitat, enhancing our understanding of gut microbiota dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides pyogenes
StrainDSM 20611 = JCM 6294

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bacteroides pyogenes DSM 20611 = JCM 6294
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides pyogenes DSM 20611 = JCM 6294


Gene Summary

Adenine Count

915207 bp

Thymine Count

932645 bp

Guanine Count

799478 bp

Cytosine Count

757513 bp

Genome Length

3404843 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive852396 - 852407Not Available
3_nc_021792: site specific recombinase, tyrosineJCM6294_1052Not AvailableNegative852636 - 85379345057.6
hypothetical proteinJCM6294_1053Not AvailableNegative853897 - 85419010964.5
hypothetical proteinJCM6294_1054Not AvailableNegative854187 - 85463316994.3
hypothetical proteinJCM6294_1055Not AvailableNegative854620 - 8548147336.64
hypothetical proteinJCM6294_1056Not AvailableNegative854817 - 85562030242.8
hypothetical proteinJCM6294_1057Not AvailablePositive855655 - 8558828778.65
hypothetical proteinJCM6294_1058Not AvailablePositive855879 - 8560466741.89
hypothetical proteinJCM6294_1059Not AvailablePositive856078 - 8562908165.87
hypothetical proteinJCM6294_1060Not AvailableNegative856406 - 8566549348.6

Displaying genes 1 – 10 of 3446 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

471 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 471 metabolites

Health Effects

No health effects information available for this bacterium.