Candidatus Brocadia sinica JPN1

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Candidatus Brocadiia

Order

Candidatus Brocadiales

Family

Candidatus Brocadiaceae

Genus

Candidatus Brocadia

Description

Candidatus Brocadia sinica JPN1 is a significant microorganism characterized by its unique genomic structure, comprising a single replicon. This trait is notable as it may influence its replication and overall genomic stability. The organism has been assigned the accession number BAFN00000000.1, which serves as a reference for its genetic data in scientific databases. Brocadia sinica JPN1 is part of the anammox (anaerobic ammonium oxidation) process, which is crucial in the nitrogen cycle. This process allows the conversion of ammonium and nitrite into nitrogen gas, an essential mechanism for nitrogen removal in various ecosystems, particularly in wastewater treatment environments. The efficiency of anammox bacteria like Candidatus Brocadia sinica contributes significantly to reducing nitrogen pollution, thereby promoting ecological balance. Understanding the genomic features of Candidatus Brocadia sinica JPN1, including its single replicon, can provide insights into its metabolic pathways and ecological roles. These insights are pivotal for biotechnological applications aimed at enhancing nitrogen removal processes. Such knowledge can lead to improved wastewater management strategies and contribute to environmental sustainability by mitigating the impacts of nitrogenous waste on aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassCandidatus Brocadiia
OrderCandidatus Brocadiales
FamilyCandidatus Brocadiaceae
GenusCandidatus Brocadia
SpeciesCandidatus Brocadia sinica
StrainJPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Brocadia sinica JPN1 DNA, contig: brosiC, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3903 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam domain proteinBROSI_A0410Not AvailableNegative451006 - 45246956150.9
transposase is4 family proteinBROSI_A0411Not AvailableNegative452550 - 45285512167.9
hypothetical proteinBROSI_A0412Not AvailablePositive453054 - 4532246352.05
fe-s oxidoreductaseBROSI_A0413Not AvailableNegative453371 - 45486157142.1
transposase and inactivated derivativesBROSI_A0414Not AvailablePositive455099 - 45573724658.8
hypothetical proteinBROSI_A0415Not AvailablePositive455744 - 45693145781.0
protein with fog: ggdef domainBROSI_A0416Not AvailablePositive457268 - 460300115922.0
two component sensor histidine kinaseBROSI_A0417Not AvailablePositive460575 - 46215259346.2
sigma 54 response regulatory proteinBROSI_A0418Not AvailablePositive462406 - 46375550309.2
glycosyltransferase family 2 proteinBROSI_A0419Not AvailablePositive463854 - 46455827230.9

Displaying genes 431 – 440 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.