Candidatus Brocadia sinica JPN1

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Candidatus Brocadiia

Order

Candidatus Brocadiales

Family

Candidatus Brocadiaceae

Genus

Candidatus Brocadia

Description

Candidatus Brocadia sinica JPN1 is a significant microorganism characterized by its unique genomic structure, comprising a single replicon. This trait is notable as it may influence its replication and overall genomic stability. The organism has been assigned the accession number BAFN00000000.1, which serves as a reference for its genetic data in scientific databases. Brocadia sinica JPN1 is part of the anammox (anaerobic ammonium oxidation) process, which is crucial in the nitrogen cycle. This process allows the conversion of ammonium and nitrite into nitrogen gas, an essential mechanism for nitrogen removal in various ecosystems, particularly in wastewater treatment environments. The efficiency of anammox bacteria like Candidatus Brocadia sinica contributes significantly to reducing nitrogen pollution, thereby promoting ecological balance. Understanding the genomic features of Candidatus Brocadia sinica JPN1, including its single replicon, can provide insights into its metabolic pathways and ecological roles. These insights are pivotal for biotechnological applications aimed at enhancing nitrogen removal processes. Such knowledge can lead to improved wastewater management strategies and contribute to environmental sustainability by mitigating the impacts of nitrogenous waste on aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassCandidatus Brocadiia
OrderCandidatus Brocadiales
FamilyCandidatus Brocadiaceae
GenusCandidatus Brocadia
SpeciesCandidatus Brocadia sinica
StrainJPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Brocadia sinica JPN1 DNA, contig: brosiC, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3903 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ssra-binding proteinBROSI_A3059Not AvailablePositive3199754 - 320019117023.9
sigma-54 dependent dna-binding response regulatorBROSI_A3060Not AvailablePositive3200241 - 320066015715.5
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidaseBROSI_A3061Not AvailablePositive3200941 - 320217945899.9
phosphatidylethanolamine n-methyltransferaseBROSI_A3062Not AvailablePositive3202187 - 320281023848.0
udp-glucose 6-dehydrogenaseBROSI_A3063Not AvailableNegative3202815 - 320411948241.3
hypothetical proteinBROSI_A3064Not AvailableNegative3204230 - 320495828062.7
hypothetical proteinBROSI_A3065Not AvailablePositive3205240 - 320596526981.2
atp-dependent metalloproteaseBROSI_A3066Not AvailableNegative3205962 - 320780967925.1
radical sam domain proteinBROSI_A3067Not AvailablePositive3208090 - 320899534278.9
hypothetical proteinBROSI_A3068Not AvailablePositive3209071 - 321030644818.5

Displaying genes 3081 – 3090 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.