Candidatus Brocadia sinica JPN1

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Candidatus Brocadiia

Order

Candidatus Brocadiales

Family

Candidatus Brocadiaceae

Genus

Candidatus Brocadia

Description

Candidatus Brocadia sinica JPN1 is a significant microorganism characterized by its unique genomic structure, comprising a single replicon. This trait is notable as it may influence its replication and overall genomic stability. The organism has been assigned the accession number BAFN00000000.1, which serves as a reference for its genetic data in scientific databases. Brocadia sinica JPN1 is part of the anammox (anaerobic ammonium oxidation) process, which is crucial in the nitrogen cycle. This process allows the conversion of ammonium and nitrite into nitrogen gas, an essential mechanism for nitrogen removal in various ecosystems, particularly in wastewater treatment environments. The efficiency of anammox bacteria like Candidatus Brocadia sinica contributes significantly to reducing nitrogen pollution, thereby promoting ecological balance. Understanding the genomic features of Candidatus Brocadia sinica JPN1, including its single replicon, can provide insights into its metabolic pathways and ecological roles. These insights are pivotal for biotechnological applications aimed at enhancing nitrogen removal processes. Such knowledge can lead to improved wastewater management strategies and contribute to environmental sustainability by mitigating the impacts of nitrogenous waste on aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassCandidatus Brocadiia
OrderCandidatus Brocadiales
FamilyCandidatus Brocadiaceae
GenusCandidatus Brocadia
SpeciesCandidatus Brocadia sinica
StrainJPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Brocadia sinica JPN1 DNA, contig: brosiC, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3903 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate ferredoxin oxidoreductase subunit betaBROSI_A3019Not AvailablePositive3162091 - 316284327641.1
hypothetical proteinBROSI_A3020Not AvailableNegative3163132 - 316412436258.6
rna-directed dna polymeraseBROSI_A3021Not AvailableNegative3164518 - 316495216767.6
retron-type reverse transcriptaseBROSI_A3022Not AvailablePositive3165268 - 316656950682.7
rna-directed dna polymeraseBROSI_A3023Not AvailableNegative3166683 - 316727622465.6
hypothetical proteinBROSI_A3024Not AvailableNegative3167261 - 316768916759.6
uncharacterized conserved proteinBROSI_A3025Not AvailableNegative3168473 - 316873610055.3
coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductaseBROSI_A3026Not AvailableNegative3168908 - 31690636104.07
seryl-trna synthetaseBROSI_A3027Not AvailablePositive3169459 - 317073648329.4
hypothetical proteinBROSI_A3028Not AvailableNegative3170782 - 317132419742.9

Displaying genes 3041 – 3050 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.