Candidatus Brocadia sinica JPN1

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Candidatus Brocadiia

Order

Candidatus Brocadiales

Family

Candidatus Brocadiaceae

Genus

Candidatus Brocadia

Description

Candidatus Brocadia sinica JPN1 is a significant microorganism characterized by its unique genomic structure, comprising a single replicon. This trait is notable as it may influence its replication and overall genomic stability. The organism has been assigned the accession number BAFN00000000.1, which serves as a reference for its genetic data in scientific databases. Brocadia sinica JPN1 is part of the anammox (anaerobic ammonium oxidation) process, which is crucial in the nitrogen cycle. This process allows the conversion of ammonium and nitrite into nitrogen gas, an essential mechanism for nitrogen removal in various ecosystems, particularly in wastewater treatment environments. The efficiency of anammox bacteria like Candidatus Brocadia sinica contributes significantly to reducing nitrogen pollution, thereby promoting ecological balance. Understanding the genomic features of Candidatus Brocadia sinica JPN1, including its single replicon, can provide insights into its metabolic pathways and ecological roles. These insights are pivotal for biotechnological applications aimed at enhancing nitrogen removal processes. Such knowledge can lead to improved wastewater management strategies and contribute to environmental sustainability by mitigating the impacts of nitrogenous waste on aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassCandidatus Brocadiia
OrderCandidatus Brocadiales
FamilyCandidatus Brocadiaceae
GenusCandidatus Brocadia
SpeciesCandidatus Brocadia sinica
StrainJPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Brocadia sinica JPN1 DNA, contig: brosiC, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3903 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved proteinBROSI_A1860Not AvailableNegative1993757 - 19939878723.86
hypothetical proteinBROSI_A1861Not AvailableNegative1994009 - 199437114121.6
isocitrate dehydrogenasesBROSI_A1862Not AvailableNegative1994412 - 199565645995.9
protein contains fog: tpr repeatBROSI_A1863Not AvailableNegative1996006 - 1998966113391.0
hypothetical proteinBROSI_A1864Not AvailableNegative1998967 - 199946118886.0
uncharacterized conserved proteinBROSI_A1865Not AvailablePositive1999834 - 200038221213.6
mannosyltransferase bBROSI_A1866Not AvailablePositive2000671 - 200154633379.8
hypothetical proteinBROSI_A1867Not AvailableNegative2001518 - 200305058640.9
glycosyltransferase family 2BROSI_A1868Not AvailableNegative2003081 - 200385729950.2
cdp-paratose 2-epimeraseBROSI_A1869Not AvailableNegative2003865 - 200492340418.9

Displaying genes 1881 – 1890 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.