Candidatus Brocadia sinica JPN1

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Candidatus Brocadiia

Order

Candidatus Brocadiales

Family

Candidatus Brocadiaceae

Genus

Candidatus Brocadia

Description

Candidatus Brocadia sinica JPN1 is a significant microorganism characterized by its unique genomic structure, comprising a single replicon. This trait is notable as it may influence its replication and overall genomic stability. The organism has been assigned the accession number BAFN00000000.1, which serves as a reference for its genetic data in scientific databases. Brocadia sinica JPN1 is part of the anammox (anaerobic ammonium oxidation) process, which is crucial in the nitrogen cycle. This process allows the conversion of ammonium and nitrite into nitrogen gas, an essential mechanism for nitrogen removal in various ecosystems, particularly in wastewater treatment environments. The efficiency of anammox bacteria like Candidatus Brocadia sinica contributes significantly to reducing nitrogen pollution, thereby promoting ecological balance. Understanding the genomic features of Candidatus Brocadia sinica JPN1, including its single replicon, can provide insights into its metabolic pathways and ecological roles. These insights are pivotal for biotechnological applications aimed at enhancing nitrogen removal processes. Such knowledge can lead to improved wastewater management strategies and contribute to environmental sustainability by mitigating the impacts of nitrogenous waste on aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassCandidatus Brocadiia
OrderCandidatus Brocadiales
FamilyCandidatus Brocadiaceae
GenusCandidatus Brocadia
SpeciesCandidatus Brocadia sinica
StrainJPN1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Brocadia sinica JPN1 DNA, contig: brosiC, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3903 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseBROSI_A1470Not AvailableNegative1539071 - 154015640603.8
metalloproteaseBROSI_A1471Not AvailableNegative1540161 - 154097630123.2
hypothetical proteinBROSI_A1472Not AvailablePositive1541419 - 154218929669.8
xre family plasmid maintenance system antidote proteinBROSI_A1473Not AvailablePositive1542601 - 15428318910.01
hypothetical proteinBROSI_A1474Not AvailablePositive1543117 - 15432846324.82
argininosuccinate synthetaseBROSI_A1475Not AvailablePositive1543309 - 154460147917.0
hypothetical proteinBROSI_A1476Not AvailablePositive1544606 - 154636967048.9
multi-sensor hybrid histidine kinaseBROSI_A1477Not AvailablePositive1546357 - 1549554119656.0
two component sigma54 specific transcriptional regulator proteinBROSI_A1478Not AvailablePositive1549565 - 155097152667.8
conserved hypothetical proteinBROSI_A1479Not AvailablePositive1551201 - 155187224705.7

Displaying genes 1491 – 1500 of 3969 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.