Gordonia amarae NBRC 15530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amarae NBRC 15530 is a bacterial species characterized by the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating that it has a singular circular chromosome structure, a common feature among many bacteria that aids in its genetic stability and replication. The genome of Gordonia amarae is represented in the accession BAED00000000.1, which provides a reference for further genomic studies and comparative analysis with other microbial species. The presence of flagella suggests that Gordonia amarae may exhibit active movement, enabling it to navigate its environment, which could be beneficial for nutrient acquisition and colonization. The ecological implications of this motility in Gordonia amarae may include its ability to adapt to varying environmental conditions and potentially influence microbial community dynamics in its habitat. Overall, the traits of Gordonia amarae NBRC 15530 highlight its characteristics as a motile bacterium with a stable genetic framework, positioning it as a notable entity within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amarae
StrainNBRC 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amarae NBRC 15530 DNA, contig: GOAMR83, whole genome

Gene Summary

Adenine Count

866798 bp

Thymine Count

860563 bp

Guanine Count

1787774 bp

Cytosine Count

1791240 bp

Genome Length

5306375 bp

Protein-coding Genes

4691 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate abc transporter permease proteinGOAMR_71_00330Not AvailableNegative4791451 - 479235632375.3
glutamate abc transporter permease proteinGOAMR_71_00340Not AvailableNegative4792353 - 479302424014.9
glutamate abc transporter substrate binding proteinGOAMR_71_00350Not AvailableNegative4793040 - 479403835719.4
glutamate abc transporter atp-binding proteinGOAMR_71_00360Not AvailableNegative4794038 - 479476626452.4
(dimethylallyl)adenosine trna methylthiotransferase miabGOAMR_71_00370Not AvailablePositive4794968 - 479653356041.5
hypothetical proteinGOAMR_71_00380Not AvailablePositive4796546 - 479718122458.1
hypothetical proteinGOAMR_71_00390Not AvailableNegative4797262 - 479861750145.2
hypothetical proteinGOAMR_71_00400Not AvailablePositive4798835 - 479965326961.1
trna dimethylallyltransferaseGOAMR_71_00410Not AvailablePositive4799650 - 480057633232.6
putative d-alanyl-d-alanine dipeptidaseGOAMR_71_00420Not AvailableNegative4800603 - 480135826526.6

Displaying genes 4291 – 4300 of 4749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.