Gordonia amarae NBRC 15530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amarae NBRC 15530 is a bacterial species characterized by the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating that it has a singular circular chromosome structure, a common feature among many bacteria that aids in its genetic stability and replication. The genome of Gordonia amarae is represented in the accession BAED00000000.1, which provides a reference for further genomic studies and comparative analysis with other microbial species. The presence of flagella suggests that Gordonia amarae may exhibit active movement, enabling it to navigate its environment, which could be beneficial for nutrient acquisition and colonization. The ecological implications of this motility in Gordonia amarae may include its ability to adapt to varying environmental conditions and potentially influence microbial community dynamics in its habitat. Overall, the traits of Gordonia amarae NBRC 15530 highlight its characteristics as a motile bacterium with a stable genetic framework, positioning it as a notable entity within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amarae
StrainNBRC 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amarae NBRC 15530 DNA, contig: GOAMR83, whole genome

Gene Summary

Adenine Count

866798 bp

Thymine Count

860563 bp

Guanine Count

1787774 bp

Cytosine Count

1791240 bp

Genome Length

5306375 bp

Protein-coding Genes

4691 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative rna polymerase ecf-type sigma factorGOAMR_54_00430Not AvailablePositive3507275 - 350839340398.1
succinate dehydrogenase iron-sulfur proteinGOAMR_54_00440Not AvailableNegative3508469 - 350926329421.5
succinate dehydrogenase flavoprotein subunitGOAMR_54_00450Not AvailableNegative3509263 - 351101764540.7
succinate dehydrogenase hydrophobic membrane anchor proteinGOAMR_54_00460Not AvailableNegative3511050 - 351150517144.0
succinate dehydrogenase cytochrome b subunitGOAMR_54_00470Not AvailableNegative3511518 - 351185612919.4
cytidine deaminaseGOAMR_54_00480Not AvailablePositive3512150 - 351255414100.0
thymidine phosphorylaseGOAMR_54_00490Not AvailablePositive3512551 - 351387945171.2
adenosine deaminaseGOAMR_54_00500Not AvailablePositive3513882 - 351499740293.0
hypothetical proteinGOAMR_54_00510Not AvailableNegative3515011 - 351627346178.3
hypothetical proteinGOAMR_54_00520Not AvailableNegative3516373 - 351666310300.9

Displaying genes 3131 – 3140 of 4749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.