Gordonia amarae NBRC 15530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amarae NBRC 15530 is a bacterial species characterized by the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating that it has a singular circular chromosome structure, a common feature among many bacteria that aids in its genetic stability and replication. The genome of Gordonia amarae is represented in the accession BAED00000000.1, which provides a reference for further genomic studies and comparative analysis with other microbial species. The presence of flagella suggests that Gordonia amarae may exhibit active movement, enabling it to navigate its environment, which could be beneficial for nutrient acquisition and colonization. The ecological implications of this motility in Gordonia amarae may include its ability to adapt to varying environmental conditions and potentially influence microbial community dynamics in its habitat. Overall, the traits of Gordonia amarae NBRC 15530 highlight its characteristics as a motile bacterium with a stable genetic framework, positioning it as a notable entity within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amarae
StrainNBRC 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amarae NBRC 15530 DNA, contig: GOAMR83, whole genome

Gene Summary

Adenine Count

866798 bp

Thymine Count

860563 bp

Guanine Count

1787774 bp

Cytosine Count

1791240 bp

Genome Length

5306375 bp

Protein-coding Genes

4691 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protocatechuate 3,4-dioxygenase beta subunitGOAMR_52_00015Not AvailablePositive3351360 - 33515135662.55
protocatechuate 3,4-dioxygenase alpha subunitGOAMR_52_00020Not AvailablePositive3351516 - 335213621929.4
3-carboxy-cis,cis-muconate cycloisomeraseGOAMR_52_00030Not AvailablePositive3352197 - 335353745659.7
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylaseGOAMR_52_00040Not AvailablePositive3353547 - 335471040556.1
putative abc transporter permease proteinGOAMR_52_00050Not AvailableNegative3354713 - 335551327956.9
putative abc transporter atp-binding proteinGOAMR_52_00060Not AvailableNegative3355510 - 335645132750.5
hypothetical proteinGOAMR_52_00070Not AvailablePositive3356612 - 335715418939.4
adenylate cyclaseGOAMR_52_00080Not AvailablePositive3357394 - 335907660527.4
putative oxidoreductaseGOAMR_52_00090Not AvailablePositive3359136 - 335996329110.2
hypothetical proteinGOAMR_52_00100Not AvailableNegative3359985 - 336062322870.2

Displaying genes 3001 – 3010 of 4749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.