Gordonia amarae NBRC 15530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amarae NBRC 15530 is a bacterial species characterized by the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating that it has a singular circular chromosome structure, a common feature among many bacteria that aids in its genetic stability and replication. The genome of Gordonia amarae is represented in the accession BAED00000000.1, which provides a reference for further genomic studies and comparative analysis with other microbial species. The presence of flagella suggests that Gordonia amarae may exhibit active movement, enabling it to navigate its environment, which could be beneficial for nutrient acquisition and colonization. The ecological implications of this motility in Gordonia amarae may include its ability to adapt to varying environmental conditions and potentially influence microbial community dynamics in its habitat. Overall, the traits of Gordonia amarae NBRC 15530 highlight its characteristics as a motile bacterium with a stable genetic framework, positioning it as a notable entity within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amarae
StrainNBRC 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amarae NBRC 15530 DNA, contig: GOAMR83, whole genome

Gene Summary

Adenine Count

866798 bp

Thymine Count

860563 bp

Guanine Count

1787774 bp

Cytosine Count

1791240 bp

Genome Length

5306375 bp

Protein-coding Genes

4691 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoribosylaminoimidazole carboxylase catalytic subunitGOAMR_48_00350Not AvailablePositive3028075 - 302865319328.3
hypothetical proteinGOAMR_48_00360Not AvailableNegative3028681 - 302941525254.3
putative lytr family regulatory proteinGOAMR_48_00370Not AvailableNegative3029475 - 303089950177.1
hypothetical proteinGOAMR_48_00380Not AvailablePositive3030898 - 30311227039.23
hypothetical proteinGOAMR_48_00390Not AvailablePositive3031473 - 30317579949.09
dtdp-6-deoxy-l-lyxo-4-hexulose reductaseGOAMR_48_00400Not AvailablePositive3032049 - 303296932307.6
dtdp-rhamnose--alpha-d-n-acetylglucosamine- diphosphoryl polyprenol, alpha-3-l-rhamnosyl transferaseGOAMR_48_00410Not AvailablePositive3033044 - 303393732186.3
putative mannose-1-phosphate guanylyltransferaseGOAMR_48_00420Not AvailablePositive3033934 - 303506439599.1
putative o-methyltransferaseGOAMR_48_00430Not AvailableNegative3035129 - 303579722544.0
rna polymerase ecf-type sigma factor sigeGOAMR_48_00440Not AvailablePositive3036090 - 303671923019.9

Displaying genes 2721 – 2730 of 4749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.