Gordonia amarae NBRC 15530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia amarae NBRC 15530 is a bacterial species characterized by the presence of flagella, which may contribute to its motility. This species possesses a single replicon, indicating that it has a singular circular chromosome structure, a common feature among many bacteria that aids in its genetic stability and replication. The genome of Gordonia amarae is represented in the accession BAED00000000.1, which provides a reference for further genomic studies and comparative analysis with other microbial species. The presence of flagella suggests that Gordonia amarae may exhibit active movement, enabling it to navigate its environment, which could be beneficial for nutrient acquisition and colonization. The ecological implications of this motility in Gordonia amarae may include its ability to adapt to varying environmental conditions and potentially influence microbial community dynamics in its habitat. Overall, the traits of Gordonia amarae NBRC 15530 highlight its characteristics as a motile bacterium with a stable genetic framework, positioning it as a notable entity within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia amarae
StrainNBRC 15530

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia amarae NBRC 15530 DNA, contig: GOAMR83, whole genome

Gene Summary

Adenine Count

866798 bp

Thymine Count

860563 bp

Guanine Count

1787774 bp

Cytosine Count

1791240 bp

Genome Length

5306375 bp

Protein-coding Genes

4691 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramate--l-alanine ligaseGOAMR_40_00330Not AvailableNegative2406839 - 240839253041.4
udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseGOAMR_40_00340Not AvailableNegative2408389 - 240948037440.4
cell division protein ftswGOAMR_40_00350Not AvailableNegative2409616 - 241127158207.6
udp-n-acetylmuramoylalanine--d-glutamate ligaseGOAMR_40_00360Not AvailableNegative2411268 - 241282452259.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseGOAMR_40_00370Not AvailableNegative2412835 - 241392638675.7
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseGOAMR_40_00380Not AvailableNegative2414025 - 241454318250.5
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseGOAMR_40_00390Not AvailableNegative2414540 - 241623758311.9
peptidoglycan synthase ftsiGOAMR_40_00400Not AvailableNegative2416495 - 241847467910.9
hypothetical proteinGOAMR_40_00410Not AvailableNegative2418496 - 241939831468.4
ribosomal rna small subunit methyltransferase hGOAMR_40_00420Not AvailableNegative2419402 - 242039735560.4

Displaying genes 2131 – 2140 of 4749 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.