Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | X566_04140 | Not Available | Positive | 856450 - 857049 | 22076.6 |
| abc transporter permease | X566_04150 | Not Available | Positive | 858573 - 860282 | 61180.3 |
| abc transporter atp-binding protein | X566_04155 | Not Available | Positive | 860279 - 861406 | 40179.5 |
| 3-hydroxyisobutyrate dehydrogenase | X566_04160 | Not Available | Negative | 861422 - 862309 | 29894.3 |
| acyl-coa dehydrogenase | X566_04165 | Not Available | Negative | 862346 - 863485 | 41115.3 |
| methylmalonate-semialdehyde dehydrogenase | X566_04170 | Not Available | Negative | 863498 - 864994 | 53389.3 |
| lysr family transcriptional regulator | X566_04175 | Not Available | Positive | 865106 - 866005 | 33476.6 |
| short-chain dehydrogenase | X566_04180 | Not Available | Negative | 866093 - 866995 | 31981.1 |
| branched-chain amino acid abc transporter substrate-binding protein | X566_04185 | Not Available | Negative | 867034 - 868263 | 44347.9 |
| 3-hydroxyacyl-coa dehydrogenase | X566_04190 | Not Available | Negative | 868323 - 869228 | 32386.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
