Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | X566_19720 | Not Available | Negative | 4120160 - 4121548 | 50429.9 |
| peptidase c14, caspase catalytic subunit p20 | X566_19725 | Not Available | Positive | 4121915 - 4123453 | 55703.4 |
| 2-deoxy-d-gluconate 3-dehydrogenase | X566_19730 | Not Available | Negative | 4123464 - 4124234 | 26108.4 |
| hypothetical protein | X566_19735 | Not Available | Positive | 4124385 - 4125038 | 24856.5 |
| acetyl-coa acetyltransferase | X566_19740 | Not Available | Positive | 4125234 - 4126415 | 41412.2 |
| dna-binding protein | X566_19745 | Not Available | Positive | 4126415 - 4126861 | 16469.8 |
| hxlr family transcriptional regulator | X566_19750 | Not Available | Negative | 4126959 - 4127297 | 12956.9 |
| nadph:quinone oxidoreductase | X566_19755 | Not Available | Positive | 4127581 - 4128582 | 35406.4 |
| dna topoisomerase iv subunit b | X566_19760 | Not Available | Negative | 4128749 - 4130812 | 75503.2 |
| cytochrome o ubiquinol oxidase | X566_19765 | Not Available | Positive | 4130973 - 4131491 | 19126.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
