Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis protein ccda | X566_18020 | Not Available | Positive | 3747073 - 3747564 | 17479.1 |
| heme lyase subunit ccmf | X566_18025 | Not Available | Positive | 3747561 - 3749543 | 70707.6 |
| cytochrome c biogenesis protein | X566_18030 | Not Available | Positive | 3749546 - 3750088 | 19923.4 |
| serine peptidase | X566_18035 | Not Available | Positive | 3750185 - 3751747 | 53705.4 |
| xre family transcriptional regulator | X566_18040 | Not Available | Positive | 3751994 - 3752719 | 27056.6 |
| glutamine-synthetase | X566_18050 | Not Available | Positive | 3754138 - 3757098 | 109903.0 |
| pas sensor protein | X566_18055 | Not Available | Negative | 3757126 - 3759453 | 85636.8 |
| cation diffusion facilitator family transporter | X566_18060 | Not Available | Negative | 3759700 - 3761073 | 49626.7 |
| quinone oxidoreductase | X566_18065 | Not Available | Negative | 3761243 - 3762214 | 33881.9 |
| short-chain dehydrogenase | X566_18070 | Not Available | Negative | 3762250 - 3763032 | 27962.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
