Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopropylmalate isomerase | X566_14340 | Not Available | Positive | 2940271 - 2940894 | 22795.4 |
| 3-isopropylmalate dehydrogenase | X566_14345 | Not Available | Positive | 2940931 - 2942070 | 41838.3 |
| hypothetical protein | X566_14350 | Not Available | Negative | 2942154 - 2942993 | 29941.3 |
| biphenyl 2,3-dioxygenase | X566_14355 | Not Available | Negative | 2943189 - 2944148 | 36023.8 |
| transcriptional regulator | X566_14360 | Not Available | Positive | 2944340 - 2945116 | 28451.3 |
| amidohydrolase | X566_14365 | Not Available | Negative | 2945117 - 2946091 | 35653.9 |
| 3-(3-hydroxyphenyl)propionate hydroxylase | X566_14370 | Not Available | Positive | 2946326 - 2947861 | 56329.2 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | X566_14375 | Not Available | Positive | 2947898 - 2948755 | 30622.8 |
| hypothetical protein | X566_14380 | Not Available | Negative | 2949301 - 2949633 | 11781.9 |
| hypothetical protein | X566_14385 | Not Available | Positive | 2950200 - 2953709 | 116821.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
