Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | X566_13855 | Not Available | Negative | 2843342 - 2844448 | 38431.1 |
| abc transporter atp-binding protein | X566_13870 | Not Available | Positive | 2847510 - 2848643 | 40186.3 |
| putrescine/spermidine abc transporter permease | X566_13875 | Not Available | Positive | 2848646 - 2849560 | 33572.2 |
| putrescine/spermidine abc transporter permease | X566_13880 | Not Available | Positive | 2849557 - 2850375 | 29029.1 |
| hypothetical protein | X566_13885 | Not Available | Positive | 2850425 - 2850754 | 11272.4 |
| cell envelope biogenesis protein asma | X566_13890 | Not Available | Negative | 2850772 - 2852694 | 67786.1 |
| succinyl-coa:3-ketoacid-coa transferase | X566_13895 | Not Available | Positive | 2852946 - 2853653 | 25381.8 |
| succinyl-coa:3-ketoacid-coa transferase | X566_13900 | Not Available | Positive | 2853680 - 2854330 | 22970.8 |
| iron abc transporter permease | X566_13905 | Not Available | Negative | 2854388 - 2855995 | 56885.9 |
| iron abc transporter substrate-binding protein | X566_13910 | Not Available | Negative | 2856137 - 2857165 | 37138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
