Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | X566_00525 | Not Available | Positive | 93843 - 95189 | 47731.4 |
| type vi secretion protein | X566_00530 | Not Available | Positive | 95161 - 96189 | 37734.2 |
| conjugal transfer protein trag | X566_00535 | Not Available | Positive | 96186 - 98327 | 79492.1 |
| luxr family transcriptional regulator | X566_00540 | Not Available | Negative | 98406 - 99149 | 27005.5 |
| rnd transporter | X566_00545 | Not Available | Negative | 99340 - 99624 | 10152.6 |
| copper tolerance protein | X566_00550 | Not Available | Negative | 99651 - 100121 | 17478.8 |
| copper oxidase | X566_00555 | Not Available | Negative | 100134 - 101528 | 51449.9 |
| copper tolerance protein | X566_00560 | Not Available | Negative | 101543 - 102871 | 48025.2 |
| hypothetical protein | X566_00565 | Not Available | Positive | 103453 - 103569 | 4103.17 |
| cation transporter | X566_00570 | Not Available | Negative | 103973 - 107041 | 111192.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
