Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | X566_00475 | Not Available | Positive | 85428 - 86093 | 23792.0 |
| conjugal transfer protein trbc | X566_00480 | Not Available | Positive | 86107 - 86409 | 10169.6 |
| conjugal transfer protein | X566_00485 | Not Available | Positive | 86406 - 86702 | 11148.9 |
| type vi secretion protein | X566_00490 | Not Available | Positive | 86710 - 89121 | 89381.5 |
| hypothetical protein | X566_00495 | Not Available | Positive | 89118 - 90005 | 29303.5 |
| conjugal transfer protein | X566_00500 | Not Available | Positive | 90017 - 90727 | 24257.8 |
| hypothetical protein | X566_00505 | Not Available | Positive | 90802 - 90993 | 6295.7 |
| conjugal transfer protein | X566_00510 | Not Available | Positive | 91196 - 92326 | 40218.9 |
| type vi secretion protein | X566_00515 | Not Available | Positive | 92323 - 93036 | 26735.7 |
| conjugal transfer protein trbg | X566_00520 | Not Available | Positive | 93033 - 93836 | 29519.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
