Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | X566_11705 | Not Available | Positive | 2396037 - 2396549 | 19343.4 |
| methionyl-trna formyltransferase | X566_11710 | Not Available | Positive | 2396591 - 2397523 | 32955.4 |
| gcn5 family acetyltransferase | X566_11715 | Not Available | Positive | 2397520 - 2398017 | 17157.8 |
| trna pseudouridine synthase a | X566_11720 | Not Available | Positive | 2398023 - 2398760 | 27222.6 |
| 5'-methylthioadenosine nucleosidase | X566_11725 | Not Available | Negative | 2398918 - 2399478 | 19783.9 |
| succinyl-diaminopimelate desuccinylase | X566_11730 | Not Available | Negative | 2399475 - 2400629 | 41444.1 |
| major facilitator transporter | X566_11735 | Not Available | Positive | 2400731 - 2401942 | 40578.7 |
| hypothetical protein | X566_11740 | Not Available | Negative | 2401953 - 2402402 | 16393.2 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | X566_11745 | Not Available | Negative | 2402589 - 2403434 | 30090.1 |
| had family hydrolase | X566_11750 | Not Available | Negative | 2403555 - 2404268 | 27018.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
