Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase | X566_10890 | Not Available | Negative | 2221106 - 2221654 | 20342.6 |
| major facilitator transporter | X566_10895 | Not Available | Negative | 2221786 - 2223012 | 42246.4 |
| isocitrate dehydrogenase | X566_10900 | Not Available | Positive | 2223434 - 2224783 | 49607.6 |
| pyridoxamine 5'-phosphate oxidase | X566_10905 | Not Available | Positive | 2224962 - 2225573 | 22365.8 |
| mfs transporter | X566_10910 | Not Available | Positive | 2225782 - 2227059 | 45141.8 |
| membrane protein | X566_10915 | Not Available | Negative | 2227270 - 2227929 | 23484.4 |
| hypothetical protein | X566_10920 | Not Available | Negative | 2227947 - 2228225 | 9202.45 |
| cro/cl family transcriptional regulator | X566_10925 | Not Available | Positive | 2228468 - 2228761 | 11070.3 |
| hypothetical protein | X566_10930 | Not Available | Positive | 2228758 - 2229216 | 16966.6 |
| hypothetical protein | X566_10935 | Not Available | Negative | 2229449 - 2230165 | 25122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
