Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | X566_08365 | Not Available | Positive | 1712018 - 1712344 | 12271.1 |
| 16s rrna-processing protein rimm | X566_08370 | Not Available | Positive | 1712375 - 1712917 | 19250.6 |
| trna (guanine-n1)-methyltransferase | X566_08375 | Not Available | Positive | 1712995 - 1713723 | 25698.8 |
| 50s ribosomal protein l19 | X566_08380 | Not Available | Positive | 1713937 - 1714323 | 14170.2 |
| hypothetical protein | X566_08385 | Not Available | Positive | 1714327 - 1714593 | 9127.63 |
| hypothetical protein | X566_08390 | Not Available | Positive | 1714681 - 1714821 | 4764.7 |
| hypothetical protein | X566_08395 | Not Available | Negative | 1714858 - 1715100 | 8828.11 |
| isopropylmalate isomerase | X566_08400 | Not Available | Positive | 1715099 - 1716505 | 50915.5 |
| hypothetical protein | X566_08405 | Not Available | Positive | 1716682 - 1716885 | 7979.56 |
| sam-dependent methyltransferase | X566_08410 | Not Available | Positive | 1716990 - 1717718 | 26955.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
