Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymethylenebutenolidase | X566_07895 | Not Available | Positive | 1611090 - 1611764 | 24025.7 |
| abc transporter substrate-binding protein | X566_07900 | Not Available | Negative | 1611824 - 1612825 | 34961.2 |
| sugar transporter | X566_07905 | Not Available | Negative | 1613168 - 1613914 | 25922.5 |
| methionine sulfoxide reductase a | X566_07910 | Not Available | Negative | 1614071 - 1614730 | 23666.0 |
| signal peptide protein | X566_07915 | Not Available | Negative | 1614878 - 1615195 | 11967.9 |
| 30s ribosomal protein s20 | X566_07920 | Not Available | Positive | 1615503 - 1615769 | 9878.07 |
| chromosomal replication initiation protein | X566_07925 | Not Available | Positive | 1616991 - 1618424 | 52934.5 |
| dna polymerase iii subunit beta | X566_07935 | Not Available | Positive | 1618640 - 1619758 | 40184.3 |
| recombinase recf | X566_07940 | Not Available | Positive | 1619891 - 1621030 | 40743.6 |
| dna gyrase subunit b | X566_07945 | Not Available | Positive | 1621260 - 1623704 | 89336.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
