Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase subunit beta | X566_07580 | Not Available | Negative | 1548381 - 1549079 | 25931.6 |
| acetyl-coa acetyltransferase | X566_07585 | Not Available | Negative | 1549198 - 1550406 | 41875.6 |
| hypothetical protein | X566_07590 | Not Available | Positive | 1550664 - 1550954 | 10427.7 |
| dna mismatch repair protein muts | X566_07595 | Not Available | Positive | 1551247 - 1554051 | 100621.0 |
| pii uridylyl-transferase | X566_07600 | Not Available | Positive | 1554354 - 1557146 | 104955.0 |
| membrane protein | X566_07605 | Not Available | Positive | 1557198 - 1557563 | 13359.9 |
| branched-chain amino acid abc transporter substrate-binding protein | X566_07610 | Not Available | Positive | 1557738 - 1558958 | 44220.9 |
| hypothetical protein | X566_07615 | Not Available | Negative | 1559055 - 1559483 | 15761.9 |
| penicillin-binding protein 1a | X566_07620 | Not Available | Positive | 1559686 - 1561899 | 78832.2 |
| metal-dependent hydrolase | X566_07625 | Not Available | Negative | 1562024 - 1562842 | 30691.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
