Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | X566_07275 | Not Available | Positive | 1487542 - 1488648 | 39095.1 |
| molecular chaperone dnaj | X566_07280 | Not Available | Negative | 1488716 - 1489348 | 23510.7 |
| bola family transcriptional regulator | X566_07285 | Not Available | Positive | 1489600 - 1489866 | 9630.48 |
| membrane protein | X566_07290 | Not Available | Negative | 1490028 - 1491347 | 48384.3 |
| 3-dehydroquinate synthase | X566_07295 | Not Available | Negative | 1491390 - 1492550 | 40376.6 |
| shikimate kinase | X566_07300 | Not Available | Negative | 1492547 - 1493293 | 26027.9 |
| hypothetical protein | X566_07305 | Not Available | Positive | 1493625 - 1493774 | 5552.01 |
| tyrosine recombinase xerd | X566_07310 | Not Available | Positive | 1493787 - 1494821 | 37110.9 |
| mfs transporter | X566_07315 | Not Available | Negative | 1494828 - 1496060 | 41987.9 |
| lysr family transcriptional regulator | X566_07320 | Not Available | Positive | 1496168 - 1497076 | 33107.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
