Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein | X566_06820 | Not Available | Negative | 1397998 - 1398972 | 36166.1 |
| pilus assembly protein | X566_06825 | Not Available | Negative | 1398980 - 1399954 | 35492.1 |
| cpaf protein secretory protein kinase | X566_06830 | Not Available | Negative | 1399951 - 1401408 | 53584.6 |
| ctpf protein | X566_06835 | Not Available | Negative | 1401430 - 1402698 | 45380.6 |
| pilus assembly protein | X566_06840 | Not Available | Negative | 1402695 - 1403438 | 26698.8 |
| secretin | X566_06845 | Not Available | Negative | 1403456 - 1404916 | 51439.1 |
| ctpc protein | X566_06850 | Not Available | Negative | 1404934 - 1405731 | 27948.3 |
| cpaa2 pilus assembly protein | X566_06855 | Not Available | Negative | 1405896 - 1406417 | 18592.4 |
| flp/fap pilin protein | X566_06860 | Not Available | Negative | 1406619 - 1406783 | 5584.84 |
| sterol desaturase | X566_06865 | Not Available | Positive | 1407086 - 1407934 | 31948.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
