Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia sp. P52-10 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
931641 bp
Thymine Count
925159 bp
Guanine Count
1600152 bp
Cytosine Count
1628497 bp
Genome Length
5085524 bp
Protein-coding Genes
4683 genes
Non-Coding Genes
146 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | X566_04870 | Not Available | Negative | 1013895 - 1014260 | 13445.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | X566_04875 | Not Available | Positive | 1014640 - 1015482 | 30751.7 |
| pyridoxamine 5'-phosphate oxidase | X566_04880 | Not Available | Negative | 1015513 - 1016157 | 23679.1 |
| lysr family transcriptional regulator | X566_04885 | Not Available | Positive | 1016259 - 1017149 | 32456.9 |
| homospermidine synthase | X566_04890 | Not Available | Positive | 1017288 - 1018721 | 52993.0 |
| signal peptide protein | X566_04895 | Not Available | Negative | 1018802 - 1019176 | 12930.1 |
| hypothetical protein | X566_04900 | Not Available | Negative | 1019344 - 1020369 | 35433.5 |
| cobalamin biosynthesis protein cobw | X566_04905 | Not Available | Negative | 1020366 - 1021430 | 39935.2 |
| metal abc transporter substrate-binding protein | X566_04910 | Not Available | Negative | 1021551 - 1022465 | 32381.6 |
| zinc abc transporter permease | X566_04915 | Not Available | Negative | 1022491 - 1023360 | 30338.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
