Eikenella corrodens CC92I

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Eikenella

Description

Eikenella corrodens CC92I is a Gram-negative bacterium characterized by its rod shape and facultative anaerobic oxygen requirement. This organism possesses a single replicon, indicating a relatively simple genomic structure. The accession number for this strain is AZGQ00000000.1, which serves as a unique identifier in genomic databases. Eikenella corrodens is part of the normal flora of the human mouth and gastrointestinal tract, and it is known for its role in human infections, particularly those associated with human bites and fistfights. The facultative anaerobic nature of CC92I allows it to thrive in various environments, adapting to both aerobic and anaerobic conditions, which is essential for its survival in the diverse ecosystems of the human body. The presence of Eikenella corrodens in both health and disease contexts highlights its ecological significance. While it can be a benign member of the microbiota, it is also implicated in opportunistic infections when the host's barrier is compromised. Understanding the characteristics of strains like CC92I is crucial for assessing their role in human health and disease, as well as for developing appropriate therapeutic strategies in clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusEikenella
SpeciesEikenella corrodens
StrainCC92I

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Eikenella corrodens CC92I
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eikenella corrodens CC92I


Gene Summary

Adenine Count

494853 bp

Thymine Count

487197 bp

Guanine Count

604989 bp

Cytosine Count

626396 bp

Genome Length

2213435 bp

Protein-coding Genes

2068 genes

Non-Coding Genes

92 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHMPREF1177_01367Not AvailablePositive1403942 - 140460722849.5
hypothetical proteinHMPREF1177_01368Not AvailableNegative1404695 - 140525521946.5
3-oxoacyl-[acyl-carrier-protein] reductaseHMPREF1177_01369Not AvailablePositive1405653 - 140638126154.8
hypothetical proteinHMPREF1177_01370Not AvailablePositive1406381 - 140760443634.0
hypothetical proteinHMPREF1177_01371Not AvailableNegative1407762 - 140823517451.4
hypothetical proteinHMPREF1177_01372Not AvailablePositive1408449 - 140885615527.2
hypothetical proteinHMPREF1177_01373Not AvailableNegative1408947 - 140961525995.3
hypothetical proteinHMPREF1177_01374Not AvailableNegative1409725 - 141058230176.1
hypothetical proteinHMPREF1177_01375Not AvailableNegative1410886 - 141165928576.2
hypothetical proteinHMPREF1177_01376Not AvailableNegative1411890 - 141278033395.3

Displaying genes 1411 – 1420 of 2160 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

324 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da

Displaying 1–10 of 324 metabolites

Health Effects

No health effects information available for this bacterium.